肠炎沙门氏菌感染济宁百日鸡后不同时间的盲肠转录组变化I符号说明SE: Salmonella enteritidis, 肠炎沙门氏菌RNA-seq:RNA Sequencing,RNA 测序DPI: day(s) post infection, 感染后天数DEG: Differently Expressed Gene, 差异表达基因PBS:Phosphate Buffered Saline, 磷酸盐缓冲液GO:Gene Ontology, 基因本位论KEGG:Kyoto encyclopedia of genes and genomes, 京都基因与基因组百科全书miRNA:microRNA, 微小 RNAPCR:polymerase chain reaction, 聚合酶链式反应QRT-PCR:Quantitative real-time PCR, 实时荧光定量 PCRTLRs: toll-like receptor, Toll 样受体NGS:Next generation sequence, 第二代测序技术BP:biological process, 生物过程MF:molecular function, 分子功能CC:cellularcomponent, 细胞组分WGCNA:Weighted Gene Co-Expression Network Analysis,加权基因共表达网络分析TOM:topological overlap matrix, 拓扑重叠矩阵ME:module eigengene, 模块特征基因GS:gene significance, 基因显著性II目 录前言............................................................................................11.1 沙门氏菌................................................................................................11.1.1 沙门氏菌病症...................................................................................21.1.2 家禽感染沙门氏菌.............................................................................21.1.3 禽沙门氏菌病....................................................................................31.1.4 家禽菌感沙门氏菌机制研究进展..........................................................51.2 转录组学................................................................................................61.2.1 基本定义..........................................................................................61.2.2 转录组学研究方法历程概述...................................................................71.2.3 RNA-seq 的数据分析........................................................................81.2.4 转录组测序在家禽中的应用..................................